Gene; SNP | Alleles | Homozygote allele 1 | Heterozygote | Homozygote allele 2 | 2df p Value | 1df p Value | OR (per allele) | 95% CI for OR | ||
1 | 2 | N | n | n | ||||||
Ptgdrs2_441 | G | A | Case | 135 | 824 | 1068 | 0.938 | 0.841 | 1.01 | 0.93 to 1.10 |
Control | 343 | 2050 | 2710 | |||||||
Ptgdrs3_197 | A | G | Case | 1567 | 426 | 32 | 0.769 | 0.747 | 1.02 | 0.91 to 1.14 |
Control | 3935 | 1111 | 74 | |||||||
Ptgdrs rs17125273 | G | A | Case | 25 | 396 | 1604 | 0.610 | 0.332 | 0.94 | 0.84 to 1.06 |
Control | 73 | 1033 | 3982 | |||||||
DPP10 rs13011555 | C | T | Case | 249 | 941 | 829 | 0.913 | 0.834 | 1.01 | 0.93 to 1.09 |
Control | 634 | 2350 | 2119 | |||||||
DPP10 rs13392783 | G | A | Case | 736 | 977 | 304 | 0.478 | 0.390 | 1.03 | 0.96 to 1.11 |
Control | 1838 | 2428 | 827 | |||||||
DPP10 rs1430091 | G | T | Case | 1218 | 697 | 94 | 0.421 | 0.478 | 1.03 | 0.95 to 1.13 |
Control | 3055 | 1736 | 276 | |||||||
DPP10 rs17048359 | C | T | Case | 206 | 880 | 911 | 0.378 | 0.165 | 0.95 | 0.88 to 1.02 |
Control | 560 | 2270 | 2219 | |||||||
DPP10 rs4241129 | T | A | Case | 803 | 839 | 203 | 0.574 | 0.552 | 1.03 | 0.95 to 1.11 |
Control | 2026 | 2092 | 557 | |||||||
DPP10 rs48493333 | C | T | Case | 128 | 777 | 1098 | 0.842 | 0.629 | 0.98 | 0.90 to 1.07 |
Control | 343 | 1971 | 2760 | |||||||
PHF11 rs2274282 | G | T | Case | 1457 | 495 | 40 | 0.675 | 0.474 | 0.96 | 0.87 to 1.07 |
Control | 3717 | 1233 | 87 | |||||||
PHF11 rs6561533 | G | A | Case | 651 | 914 | 392 | 0.512 | 0.435 | 1.03 | 0.96 to 1.11 |
Control | 1571 | 2366 | 991 | |||||||
PHF11 rs6561539 | G | C | Case | 53 | 508 | 1449 | 0.305 | 0.909 | 1.01 | 0.91 to 1.11 |
Control | 107 | 1337 | 3659 | |||||||
GPRA rs323917 | C | G | Case | 1762 | 240 | 6 | 0.912 | 0.710 | 0.97 | 0.84 to 1.13 |
Control | 4461 | 593 | 13 | |||||||
GPRA rs323922 | G | C | Case | 322 | 963 | 730 | 0.458 | 0.616 | 0.98 | 0.91 to 1.06 |
Control | 796 | 2518 | 1781 | |||||||
GPRA rs324377 | C | A | Case | 389 | 986 | 640 | 0.229 | 0.987 | 1.00 | 0.93 to 1.08 |
Control | 926 | 2605 | 1562 | |||||||
GPRA rs324396 | C | T | Case | 929 | 892 | 195 | 0.798 | 0.524 | 1.03 | 0.95 to 1.11 |
Control | 2304 | 2287 | 505 | |||||||
GPRA rs740347 | G | C | Case | 43 | 492 | 1481 | 0.431 | 0.722 | 1.02 | 0.92 to 1.13 |
Control | 86 | 1265 | 3743 | |||||||
ADAM33 rs511898 | C | T | Case | 871 | 898 | 237 | 0.290 | 0.139 | 0.94 | 0.87 to 1.02 |
Control | 2279 | 2261 | 541 | |||||||
ADAM33 rs528557 | C | G | Case | 1100 | 801 | 141 | 0.396 | 0.242 | 1.05 | 0.97 to 1.14 |
Control | 2831 | 2008 | 314 | |||||||
ADAM33 rs574174 | C | T | Case | 1357 | 605 | 59 | 0.850 | 0.608 | 1.03 | 0.93 to 1.13 |
Control | 3398 | 1542 | 160 | |||||||
ADAM33 rs612709 | G | A | Case | 37 | 483 | 1512 | 0.841 | 0.781 | 1.01 | 0.91 to 1.13 |
Control | 83 | 1218 | 3814 |
The 2df test relates to whether incidence varies across the three genotypes (without an assumed genetic model). The 1df test assumes a per-allele (additive) model.
SNP, single nucleotide polymorphism.