Table 2

Results of rifampicin probe compared with phenotypic sensitivity (2003–2009)

Sample and AFB smear results (2003–2009)Sensitivity (%)CISpecificity (%)CIPPV (%)CINPV (%)CIAccuracy (%)CI
All* 122\132 (92.4)86.1 to 96.12160\2174 (99.4)98.9 to 99.6122\136 (89.7)83.0 to 94.02160\2170 (99.5)99.1 to 99.82282\2306 (99.0)98.4 to 99.3
All smear +ve92\99 (92.9)85.5 to 96.91811\1823 (99.3)98.8 to 99.692\104 (88.5)80.3 to 93.61811\1818 (99.6)99.2 to 99.81903\1922 (99.0)98.4 to 99.4
All smear −ve21\24 (87.5)66.5 to 96.7188\189 (99.5)96.6 to 100.021\22 (95.5)75.1 to 99.8188\191 (98.4)95.1 to 99.6209\213 (98.1)94.9 to 99.4
Respiratory*109\116 (94.0)64.6 to 90.61768\1779 (99.4)98.8 to 99.6109\120 (90.8)57.8 to 84.91768\1775 (99.6)99.1 to 99.81877\1895 (99.1)98.3 to 99.3
Respiratory smear +ve52\56 (92.9)81.9 to 97.71554\1559 (99.7)99.2 to 99.952\57 (91.2)80.0 to 96.71554\1558 (99.7)99.3 to 99.91606\1615 (99.4)98.9 to 99.7
Respiratory smear −ve20\21 (95.2)74.1 to 99.8100\100 (100.0)95.4 to 100.020\20 (100.0)80.0 to 100.0100\101 (99.0)93.8 to 99.9120\121 (99.2)94.8 to 100.0
Non- respiratory*12\14 (85.7)56.2 to 97.5408\410 (99.5)98.1 to 99.912\14 (85.7)56.2 to 97.5408\410 (99.5)98.1 to 99.9420\424 (99.1)97.4 to 99.7
Non- respiratory smear +ve8\11 (72.7)39.3 to 92.7256\257 (99.6)97.5 to 100.08\9 (88.9)50.7 to 99.4256\259 (98.8)96.4 to 99.7264\268 (98.5)96.0 to 99.5
Non- respiratory smear −ve1\3 (33.3)1.8 to 87.5169\171 (98.9)95.4 to 99.81\3 (33.3)1.8 to 87.5169\171 (98.8)95.4 to 99.8170\174 (97.7)93.8 to 99.3
Sputum*93\101 (92.1)84.5 to 96.31555\1566 (99.3)98.7 to 99.693\104 (89.4)81.5 to 94.31555\1563 (99.5)99.0 to 99.81648\1667 (98.9)98.2 to 99.3
Sputum smear +ve70\75 (93.3)84.5 to 97.51392\1402 (99.3)98.6 to 99.670\80 (87.5)77.8 to 93.51392\1397 (99.6)99.1 to 99.91462\1477 (99.0)98.3 to 99.4
Sputum smear −ve16\16 (100.0)75.9 to 100.063\63 (100.0)92.8 to 100.016\16 (100.0)75.9 to 100.063\63 (100.0)92.8 to 100.079\79 (100.0)94.2 to 100.0
  • * Smear negative + smear positive + smear unknown.

  • Respiratory samples + non-respiratory samples + unclassified samples.

  • AFB, acid-fast bacilli; BAL, bronchoalveolar lavage; NPV, negative predictive value; PPV, positive predictive value; −ve, negative; +ve, positive.