Table 1

Number of open chromatin sites in human tracheal epithelial cells and the six other cell types that were used for comparison

DNase-seq cell linesNumber of open chromatin sites
HTE (human tracheal epithelial cell)153 504
FibroP (normal fibroblast from patients with Parkinson's)139 663
GM12878 (lymphoblastoid)124 321
HeLa-S3 (cervical carcinoma)141 165
HepG2 (liver carcinoma)115 765
HUVEC (human umbilical vein endothelial cell)126 284
NHEK (normal human epidermal keratinocyte)140 520
  • DNase-seq, DNase I hypersensitivity mapping followed by deep sequencing.