Gene (cytogenetic position) | SNP number in this study | rs Number (major/minor allele) | Position | Position in gene, subst | MAF | |
A | B | |||||
TLR7 (Xp22) | 1 | rs179008 (A/T) | 12813580 | Ex3, Q11>L | T: 0.24 | 0.21 |
2 | rs5743781 (C/T)* | 12814891 | Ex3, A448>V | T: 0.012 | 0.003 | |
3 | rs864058 (C/T) | 12815951 | Ex3, syn | T: 0.074 | 0.11 | |
TLR8 (Xp22) | 4 | rs5741883 (C/T) | 12834142 | Promoter | T: 0.25 | 0.20 |
5 | rs3764879 (C/G) | 12834618 | Promoter | G: 0.24 | 0.24 | |
6 | rs3764880 (A/G) | 12834747 | Ex1, M1>V | G: 0.21 | 0.22 | |
7 | rs5744077 (A/G)* | 12847108 | Ex2, M10>V | G: 0.002 | 0 | |
8 | rs2159377 (C/T) | 12847434 | Ex2, syn | T: 0.19 | 0.15 | |
9 | rs2407992 (G/C) | 12849033 | Ex2, syn | C: 0.42 | 0.38 |
Position according to UCSC (http://genome.ucsc.edu/, Mar. 06 assembly).
*SNPs included from dbSNP (http://www.ncbi.nlm.nih.gov/projects/SNP/).
MAF, minor allele frequency; TLR, Toll-like receptor.