Article Text


Original article
Diagnostic accuracy of pulmonary host inflammatory mediators in the exclusion of ventilator-acquired pneumonia
  1. Thomas P Hellyer1,
  2. Andrew Conway Morris2,3,
  3. Daniel F McAuley4,5,
  4. Timothy S Walsh2,
  5. Niall H Anderson6,
  6. Suveer Singh7,
  7. Paul Dark8,
  8. Alistair I Roy9,
  9. Simon V Baudouin1,10,
  10. Stephen E Wright11,
  11. Gavin D Perkins12,
  12. Kallirroi Kefala13,
  13. Melinda Jeffels14,
  14. Ronan McMullan15,
  15. Cecilia M O'Kane4,
  16. Craig Spencer16,
  17. Shondipon Laha16,
  18. Nicole Robin17,
  19. Savita Gossain18,
  20. Kate Gould19,
  21. Marie-Hélène Ruchaud-Sparagano1,
  22. Jonathan Scott1,
  23. Emma M Browne1,
  24. James G MacFarlane1,
  25. Sarah Wiscombe1,
  26. John D Widdrington1,
  27. Ian Dimmick20,
  28. Ian F Laurenson21,
  29. Frans Nauwelaers22,
  30. A John Simpson1
  1. 1Institute of Cellular Medicine, Medical School, Newcastle University, Newcastle upon Tyne, UK
  2. 2MRC Centre for Inflammation Research, University of Edinburgh, Edinburgh, UK
  3. 3Department of Anaesthesia, University of Cambridge, Cambridge Biomedical Campus, Cambridge, UK
  4. 4Centre for Infection and Immunity, Health Sciences Building, Queen's University Belfast, Belfast, UK
  5. 5Regional Intensive Care Unit, Royal Victoria Hospital, Belfast, UK
  6. 6Centre for Population Health Sciences, University of Edinburgh, Medical School, Edinburgh, UK
  7. 7Intensive Care Unit, Chelsea and Westminster Hospital, Imperial College London, London, UK
  8. 8Institute of Inflammation and Repair, University of Manchester, Manchester Academic Health Sciences Centre & Intensive Care Unit, Salford Royal NHS Foundation Trust, Greater Manchester, UK
  9. 9Integrated Critical Care Unit, Sunderland Royal Hospital, Sunderland, UK
  10. 10Intensive Care Unit, Royal Victoria Infirmary, Newcastle upon Tyne, UK
  11. 11Intensive Care Unit, Freeman Hospital, Newcastle upon Tyne, UK
  12. 12University of Warwick and Heart of England NHS Foundation Trust, Coventry, UK
  13. 13Intensive Care Unit, Royal Infirmary of Edinburgh, Edinburgh, UK
  14. 14Newcastle Clinical Trials Unit, William Leech Building, Medical School, Newcastle University, Newcastle upon Tyne, UK
  15. 15Department of Medical Microbiology, Kelvin Building, The Royal Hospitals, Belfast, UK
  16. 16Intensive Care Unit, Lancashire Teaching Hospitals NHS Foundation Trust, Preston, UK
  17. 17Intensive Care Unit, Countess of Chester NHS Trust, Chester, UK
  18. 18Public Health Laboratory, Heart of England NHS Foundation Trust, Birmingham, UK
  19. 19Public Health England & Newcastle upon Tyne Hospitals NHS Foundation Trust, Freeman Hospital, Newcastle upon Tyne, UK
  20. 20Bioscience Centre (West Wing), International Centre for Life, Newcastle University, Newcastle upon Tyne, UK
  21. 21Department of Clinical Microbiology, Royal Infirmary of Edinburgh, Edinburgh, UK
  22. 22Becton Dickinson Biosciences, Erembodegem (Aalst), Belgium
  1. Correspondence to Professor John Simpson, Institute of Cellular Medicine, 3rd Floor William Leech Building, Medical School, Newcastle University, Framlington Place, Newcastle upon Tyne NE2 4HH, UK; j.simpson{at}


Background Excessive use of empirical antibiotics is common in critically ill patients. Rapid biomarker-based exclusion of infection may improve antibiotic stewardship in ventilator-acquired pneumonia (VAP). However, successful validation of the usefulness of potential markers in this setting is exceptionally rare.

Objectives We sought to validate the capacity for specific host inflammatory mediators to exclude pneumonia in patients with suspected VAP.

Methods A prospective, multicentre, validation study of patients with suspected VAP was conducted in 12 intensive care units. VAP was confirmed following bronchoscopy by culture of a potential pathogen in bronchoalveolar lavage fluid (BALF) at >104 colony forming units per millilitre (cfu/mL). Interleukin-1 beta (IL-1β), IL-8, matrix metalloproteinase-8 (MMP-8), MMP-9 and human neutrophil elastase (HNE) were quantified in BALF. Diagnostic utility was determined for biomarkers individually and in combination.

Results Paired BALF culture and biomarker results were available for 150 patients. 53 patients (35%) had VAP and 97 (65%) patients formed the non-VAP group. All biomarkers were significantly higher in the VAP group (p<0.001). The area under the receiver operator characteristic curve for IL-1β was 0.81; IL-8, 0.74; MMP-8, 0.76; MMP-9, 0.79 and HNE, 0.78. A combination of IL-1β and IL-8, at the optimal cut-point, excluded VAP with a sensitivity of 100%, a specificity of 44.3% and a post-test probability of 0% (95% CI 0% to 9.2%).

Conclusions Low BALF IL-1β in combination with IL-8 confidently excludes VAP and could form a rapid biomarker-based rule-out test, with the potential to improve antibiotic stewardship.

  • Pneumonia

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Key messages

What is the key question?

  • Ventilator-acquired pneumonia (VAP) is notoriously difficult to diagnose clinically, so this multicentre study aimed to determine whether VAP could be rapidly and accurately excluded by quantifying host biomarkers.

What is the bottom line?

  • Low concentrations of interleukin-1 beta and interleukin-8 effectively exclude VAP using a system that yields results within 6 h.

Why read on?

  • To our knowledge, this is the first study to validate the effective, rapid exclusion of VAP using host proteins, paving the way for future trials assessing whether these markers can improve antibiotic stewardship in the intensive care unit.


Antibiotic resistance has been increasing rapidly, making antibiotic stewardship a priority for healthcare systems globally. Patients admitted to the intensive care unit (ICU) receive a significant burden of antibiotics.1 Ventilator-acquired pneumonia (VAP) occurs in 10%–20% of the ICU population.2 VAP poses a dilemma for clinicians seeking to improve antibiotic stewardship. The diagnosis of VAP is challenging and pulmonary infection is confirmed in only approximately 30% of patients with suspected VAP.3 ,4 Despite this, since VAP is associated with significant mortality and morbidity, and because significant delays in appropriate treatment have been linked to increases in mortality,5 patients are often treated with antibiotics from the moment of initial suspicion. This is compounded by the fact that conventional microbiology culture and sensitivity results typically take up to 72 h to return to clinicians.

Novel biomarker-based diagnostic techniques, if suitably accurate and rapid, would offer a significant change in the clinical information available at the time of suspected infection and could reduce unnecessary antibiotic use. However, to our knowledge, no protein biomarkers showing promise in initial derivation studies have gone on to yield confirmatory diagnostic utility in multicentre validation studies.

In a single-centre derivation cohort, mediators of the host inflammatory response measured in bronchoalveolar lavage (BAL) fluid from patients with suspected VAP demonstrated potential as biomarkers for the exclusion of pneumonia. In particular, low concentrations of BAL fluid interleukin (IL)-1β appeared to be able to rule out VAP effectively.6 IL-8 and the neutrophil proteases matrix metalloproteinase-8 (MMP-8), MMP-9 and human neutrophil elastase (HNE) also showed promise in excluding VAP.7 We, therefore, conducted a pragmatic multicentre validation study of these five BAL fluid biomarkers in patients with suspected VAP.


Study design and participants

We conducted a prospective, multicentre, observational study in 12 general UK ICUs, with screening performed on week days between February 2012 and February 2013. A wide case mix of medical, surgical and trauma patients was represented. Patients were eligible if they were aged 18 years or more and if they had been endotracheally intubated and mechanically ventilated for at least 48 h. VAP was suspected if the patient had new or worsening alveolar shadowing on chest radiograph (CXR) and if at least 2 of the following criteria were present: purulent tracheal secretions; temperature <35°C or >38°C; or a blood white cell count <4×109/L or >11×109/L. Patients were excluded based on criteria predicting poor tolerance of bronchoscopy and BAL: PaO2 <8 kPa on FiO2 >0.7; positive end-expiratory pressure >15 cm H2O; peak airway pressure >35 cm H2O; heart rate >140 bpm; mean arterial pressure <65 mm Hg; bleeding diathesis (including platelet count <20×109/L or international normalised ratio >3); or intracranial pressure >20 mm Hg. Patients were also excluded if the ICU clinician responsible for the patient's care considered the procedure to be unsafe, if the patient had a previous BAL as part of this study or if consent/assent was not obtained.

Consent or assent was obtained according to approved procedures for incapacitated adults. The study was approved by the appropriate research ethics committees within the National Research Ethics Service (England and Northern Ireland (11/NE/0242), Scotland (11/SS/0089)). Study monitoring and oversight were provided by Newcastle Clinical Trials Unit.


Participants underwent a protocolised bronchoscopy and BAL performed by either the clinical team or local investigators. In summary, BAL was performed in a region of the lung corresponding to an area of new alveolar infiltrate on CXR. If multiple areas were involved, the BAL was performed in a segment or subsegment from which purulent secretions were visualised. If the CXR changes were extensive or there was doubt over which segment to lavage, the posterior segment of the right lower lobe was sampled.8 Patients received 100% oxygen and sedation with or without paralysis according to the clinical team's preference. The bronchoscope was gently wedged in the segment to be lavaged. The first 20 mL saline instillate was aspirated and discarded. Thereafter, three 40 mL aliquots of saline were instilled, aspirated and pooled.

A 2 mL aliquot of BAL fluid was sent to a National Health Service or Public Health England microbiology laboratory for semiquantitative culture. BAL fluid was handled according to a standard operating procedure in accordance with the UK Standards for Microbiological Investigation.9 VAP was confirmed by growth of potential pathogens at >104 colony forming units per millilitre (cfu/mL), the value of which as a reference test in VAP has been discussed extensively elsewhere.2 Sterile specimens or growth below this threshold identified the ‘non-VAP’ group. The remaining BAL fluid was centrifuged at 700 g for 10 min. The supernatant was aspirated and stored frozen for subsequent biomarker quantification, which was performed at a single site (Newcastle University) at the end of study recruitment. Therefore, routine clinical care was provided to all patients involved, without access to biomarker results.

Biomarkers in BAL fluid were measured by cytometric bead array (CBA) and analysed using an Accuri C6 flow cytometer (Becton Dickinson Biosciences, New Jersey, USA). Results are generated within approximately 4 h. Levels of IL-1β, IL-8, MMP-8, MMP-9 and HNE were determined in BAL fluid in a 5-bead multiplex according to the manufacturer's instructions. CBA kits for IL-1β and IL-8 were commercially available, whereas CBA kits for MMP-8, MMP-9 and HNE were custom-made for the study. All samples were measured in dilutions of 1:5, 1:50 and 1:500. Samples which fell below the standard range in the 1:5 dilution were repeated using undiluted BAL fluid. CBA was carried out by a single trained investigator, who was unaware of the culture results, in a separate laboratory to which BAL fluid cultures were performed.

Clinical data were collected on ICU length of stay, duration of mechanical ventilation, time to ICU and hospital discharge, in-hospital mortality, ICU mortality, admission category (medical or surgical), Acute Physiology and Chronic Health Evaluation II score on admission, use of renal replacement therapy, use of vasopressors, use of corticosteroids and whether criteria for acute respiratory distress syndrome were met.10 Data were also collected on antibiotic use on day of enrolment and during the preceding 72 h; and antibiotic days and antibiotic-free days (AFD) in the 7 days following BAL.

Statistical considerations

Sample size was estimated from the derivation study post-test probability (PTP) of VAP using the IL-1β threshold value for exclusion.6 Below the threshold, IL-1β excluded VAP with a PTP of 2.8% (95% CI 0.1% to 15.9%). To improve the external validity of this result, a sample size was based on narrowing the 95% CI. We estimated that 24% of patients would have confirmed VAP based on the derivation cohort. A sample size of 140 was estimated to allow a 95% CI for a PTP of 3% to be 0% to 8%, which was judged tight enough for potential clinical use. We, therefore, planned to recruit 160 patients to allow for a dropout rate of approximately 15%.

Statistical analysis was performed using SPSS V.19 (Chicago, Illinois, USA) and R Comparisons for non-normally distributed continuous data were made with the Mann–Whitney U test, otherwise with the Student t test. Binary outcomes were analysed using the χ2 test.

Since the objective was to validate a rule-out for VAP, the statistical analysis was performed to determine the maximum sensitivity and negative predictive value (NPV). Patients were dichotomised into a VAP group and non-VAP group according to growth in BAL fluid of >104 cfu/mL or ≤104 cfu/mL. Individual biomarkers that were significantly different between groups were analysed by receiver operator characteristic (ROC) procedures. Biomarkers were log10 transformed with the addition of a constant of one before being tested in combination. Log10 transformed biomarkers were entered into a logistic regression model and ROC curves were constructed from the predictive model. Cut-points for individual biomarkers and combinations were determined by fixing a minimum NPV of 95%. The diagnostic rules, diagnostic performance measures and associated 95% CIs were derived using the OptimalCutpoints library in R3.0.0.12


Four hundred and fifteen patients satisfied criteria for suspected VAP, of whom 248 had exclusion criteria. Of the remaining 167 patients, 150 had paired microbiological culture and biomarker results from BAL fluid and were entered into the analysis. Fifty-three patients (35%) had confirmed VAP and the remaining 97 (65%) patients comprised the non-VAP group. The Standards for Reporting of Diagnostic Accuracy (STARD) diagram is provided at the end of the Results section, after the rationale for the optimal diagnostic test has been described.

The VAP and non-VAP groups were similar in terms of demographics and clinical characteristics (table 1). The VAP group was associated with less use of antibiotics prior to BAL, less use of corticosteroids and a higher proportion of surgical patients, but only the first of these was statistically significant (table 1).

Table 1

Patient characteristics.

The organisms grown at >104 cfu/mL are shown in table 2. Gram-negative bacteria accounted for approximately 60% of identified organisms, Gram-positive organisms 30% and fungi 10%. In the VAP group, 39 patients (73%) had growth of a single micro-organism, 12 (23%) had two micro-organisms and 2 patients had three micro-organisms cultured at >104 cfu/mL.

Table 2

Organisms cultured at >104 cfu/mL

One hundred and ten patients (73.3%) were receiving antibiotics at the time of BAL, but only 35 patients (23.3%) had a new antibiotic started in the 72 h before BAL, with no significant difference between the VAP and non-VAP groups (p=0.078). In the 7 days following BAL, 57.6% of patients had no AFD, with the median AFD being 0 (IQR 0–2) days. The distribution of AFD in the 7 days following BAL is shown in figure 1.

Figure 1

Frequency distribution of AFD in the 7 days following bronchoalveolar lavage. AFD, antibiotic-free days, represented as an integer value.

There were significant differences in the concentrations of IL-1β, IL-8, MMP-8, MMP-9 and HNE in BAL fluid when comparing the VAP and non-VAP groups (p<0.001 for all comparisons) (table 3). Therefore, ROC curves were constructed for all 5 biomarkers to determine diagnostic utility and optimum cut-off points. Selecting cut-points to obtain a minimum NPV of 95% resulted in unacceptably low specificity for IL-8, MMP-8 and HNE (table 4).

Table 3

Biomarker concentration

Table 4

Individual biomarkers and biomarker combinations

Log10 transformed biomarkers were highly correlated, with Pearson's correlation coefficients ranging from 0.79 to 0.93. IL-1β was the strongest individual predictor of VAP; therefore, combinations of biomarkers were tested with IL-1β. ROC curves were constructed for combinations and performance at optimal cut-points derived. The top performing biomarker combinations were IL-1β/IL-8/MMP-8/MMP-9 (cut-point −1.7015 on the scale of the linear predictor) with a sensitivity of 100% and a specificity of 46.4%, and IL-1β/IL-8 (cut-point −1.7616 on the scale of the linear predictor) with a sensitivity of 100% and a specificity of 44.3% (table 4).

The area under the ROC curve (AUROC) for the IL-1β/IL-8 combination was 0.81 (95% CI 0.74 to 0.88) (figure 2). Our aim of achieving a high NPV resulted in a lower specificity; however, either of these biomarker combinations could exclude VAP with a PTP of 0% (95% CI 0% to 7.8% for the 4-biomarker combination; 0% to 9.2% for the 2-biomarker combination). A 2-biomarker combination would have pragmatic advantages over a 4-biomarker combination for future clinical application. As a further validation of the logistic regression model, the 2-biomarker model was applied to the biomarkers from the derivation cohort.6 ,7 The resulting AUROC was 0.85 (95% CI 0.75 to 0.94). Using the same cut-point of −1.7616 yielded a sensitivity of 94.1%, a specificity of 56.4% and an NPV of 96.9%.

Figure 2

Receiver operator characteristic (ROC) curve of interleukin (IL)-1β and IL-8 combination. ROC curve of linear predictor of IL-1β and IL-8 logistic regression. Area under the ROC curve=0.81 (95% CI 0.74 to 0.88).

The STARD diagram for the study is shown in figure 3.

Figure 3

STARD diagram for IL-1β/IL-8 combination. BAL, bronchoalveolar lavage; IL, interleukin; VAP, ventilator-acquired pneumonia; STARD, Standards for Reporting of Diagnostic Accuracy.


This multicentre validation cohort from a broad ICU population yielded results very similar to those from our previous single-centre derivation cohort. The optimal cut-offs for IL-1β were also similar in the 2 studies (10 vs 17 pg/mL), the small difference probably being explained by the lower volume of BAL instilled in this study (120 mL vs 200 mL). The data, therefore, potentially provide important information towards the development of new, rapid diagnostic strategies for infection in the ICU. Successful validation of initially promising derivation studies has represented a major hurdle in the development of new diagnostics in the ICU setting. Of the five biomarkers investigated, all were significantly higher in VAP than in the non-VAP group. We demonstrate that IL-1β, in particular, is a powerful biomarker for the exclusion of VAP. Indeed, when the diagnostic utility of combinations of biomarkers was tested, IL-1β was the predominant component of all models. The combination of IL-1β and IL-8 could exclude VAP with an NPV of 1, suggesting this simple combination has significant potential as a rule-out test for VAP. The cut-point was selected with the aim of determining the optimal characteristics for exclusion of VAP. With an NPV of 1 but a positive predictive value of 0.50, the biomarkers reflect the performance of a satisfactory ‘rule-out’ test. Furthermore, this assay typically takes approximately 4 h to perform, yielding a rapid and novel biomarker combination to exclude VAP.

There is growing evidence that short courses of antibiotics for suspected sepsis in the ICU may be safe. In contrast, there is evidence that overuse of antibiotics could be harmful.13 Our data suggest that if empirical antibiotics were started in all patients with suspected VAP, they could potentially be discontinued with high confidence within a few hours in response to low IL-1β and IL-8 concentrations in BAL fluid. If clinicians were prepared to change antibiotic prescription based on the rule-out results, we estimate that up to 30% of patients with suspected VAP could have early discontinuation of antibiotics, when they would otherwise be continued.

To our knowledge, no other biomarkers have been shown to be so robust for the exclusion of VAP. The most widely investigated biomarkers in VAP are procalcitonin and type 1 soluble triggering receptor expressed on myeloid cells (sTREM-1), which have been analysed in both BAL fluid and serum.14–16 In addition, other biomarkers, including elastin fibres, copeptin, nitrated proteins, serum β-d-glucan, pancreatic stone protein, midregional pro-atrial natriuretic peptide, pentraxin 3, Clara cell protein, leucocyte RNA profiles, leptin, and gene expression, have been investigated.17–27 These biomarkers have generally shown inconsistent results, often with poor diagnostic or prognostic utility. The biomarkers analysed in the present study potentially have biological plausibility in that IL-1β and IL-8 are pro-inflammatory cytokines, while MMP-8, MMP-9 and HNE may be released from activated neutrophils during degranulation, and one might expect these mediators to be elevated in regions of lung in which there is active infection.

The diagnostic criteria and method of sampling used have been variable in previous biomarker studies in suspected VAP. Although debate continues over the merits of bronchoscopic and non-bronchoscopic methods for respiratory sampling in terms of clinical outcomes, the need for consistent alveolar sampling is probably of greater importance when measuring biomarkers in suspected VAP. VAP is known to be a patchy process,8 and ‘blind’ BAL methods may (at least theoretically) either sample unaffected alveolar regions or, worse, proximal non-alveolar airway. When seeking VAP, it seems logical to sample the alveolar regions of radiologically affected lung. Although one other study did not show any diagnostic utility from IL-1β,16 this variance to our findings may be due to sampling by mini-BAL. Our results can only be extrapolated from the protocolised BAL used in this study, and certainly our cut-off values cannot be extrapolated to mini-BAL, for example. Although the practical implications and cost of BAL may be perceived as potential disincentives, BAL is a common procedure in the ICU and the full cost implications can only be considered once the impact on antibiotic prescribing has been determined in future studies.

Our study has a number of potential limitations. As with many ICU studies, exclusion criteria eliminated 60% of patients who met inclusion criteria, potentially reducing the generalisability. A caveat of our reliance on BAL sampling is that some patients are too unstable to tolerate the procedure. We estimate that 67 patients (16%) who met inclusion criteria were excluded on safety grounds precluding bronchoscopy (data not shown).

A further potential limitation is that a large proportion of patients (73.3%) were on antibiotics at the time of BAL, which could potentially have resulted in false negative microbiology and, perhaps, even falsely low biomarker levels. However, far fewer patients had a new antibiotic started in the 72 h before BAL (23.3%) with no significant difference between the VAP and non-VAP groups. Importantly, this was a pragmatic validation study, and excluding patients on antibiotics would have further limited its generalisability. Performing a subanalysis of IL-1β to exclude patients who received new antibiotics in 72 h before BAL (therefore including 69 non-VAP and 46 VAP patients) resulted in an AUROC of 0.78 (95% CI 0.70 to 0.87), suggesting that the effect of antibiotics may not be of great significance.

An additional consideration is that our ‘standard’ for the diagnosis of VAP—potential pathogens at >104 cfu/mL in BAL fluid—is imperfect. If a patient is on an antibiotic at the time of BAL and a pathogen sensitive to that antibiotic is cultured, but at <104 cfu/mL, clinicians may find it hard to be absolutely confident that VAP is excluded. The obvious difficulty here is that the true diagnostic ‘gold standard’ of simultaneous culture and histological examination of infected and inflamed alveolar tissue is impractical. In this setting, quantitative culture generally performs at least as well as other suggested diagnostic modalities, and better than clinical diagnosis without sampling.2 ,28 Taken overall, we can only conclude that our study validates the performance of IL-1β and IL-8 in the specific setting of the protocolised BAL and the definition of VAP used here.

Furthermore, determining the highest achievable sensitivity comes at the cost of specificity. As the specificity decreases, the proportion of non-VAP patients correctly ruled out by the biomarker combination reduces. However, this trade-off is necessary to exclude VAP with the lowest possible PTP, to give the clinician confidence in the rule-out performance and therefore allow early antibiotic discontinuation. We also recognise that a blood marker(s) excluding VAP would be far more desirable than BAL fluid markers, given that some patients may not be suitable for BAL and that there is potential interoperator technical variability in BAL. However, at present, no good blood biomarkers exist in this context.

A further issue concerns the ongoing controversy as to whether Candida spp in BAL fluid at >104 cfu/mL are contaminants or potentially pathogenic. We included Candida on the basis that, in critically ill patients, clinicians may find it hard to ignore potential pathogens at such high concentrations from an affected region of lung. In any event, isolated growth of Candida was rare in our hands. Finally, a diagnostic test is only valuable if it beneficially alters practice, and it remains to be seen whether clinicians will be prepared to alter antibiotic use based on a biomarker test—this requires to be scrutinised formally in the setting of a randomised controlled trial.

In summary, this study confirms that IL-1β effectively excludes VAP when validated in a multicentre study. Performance is improved further by the addition of IL-8, and the combination could form a relatively simple, rapid diagnostic assay to exclude VAP. Biomarker analysis appears to have the potential to improve antibiotic stewardship early in the course of suspected VAP. Whether this concept can lead to effective improvements in antibiotic stewardship remains to be seen and should be the focus of randomised controlled trials.


We are grateful to all participating patients and their relatives. We also wish to thank members of all participating ICUs and microbiology departments. We are grateful to the following colleagues for specific help: Helen Walsh, Sarah Nutbrown, Charley Higham, Teresa Melody, Keith Couper, Jacqueline Baldwin, Alexandra Williams, Kylie Norrie, Julie Furneval, Tracey Evans, Heidi Dawson, Griania White, Lia McNamee, Leona Bannon, Laura Evans, Neil Young, Alasdair Hay, Ross Paterson, Stuart McLellan, Peter Kelleher, Berge Azadian, Masao Takata, Ildiko Kustos, John Cheesborough, Roland Koerner, John McNair and John Fewster. We are extremely grateful to James Keenan, Line de Kimpe and Tina Van Den Broeck from BD Biosciences for advice and support.


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  • Contributors AJS, ACM, TSW, DFMcA, GDP, RMcM, SVB, CMO'K, FN and AJS conceived, designed and obtained funding for the study. TH, MJ and AJS managed the study. NHA, ACM and TH contributed to statistical design and analysis. ACM, TH, DFMcA, SS, PD, AIR, SVB, SEW, GDP, KK, CS, SL and NR collected clinical data and performed clinical procedures. TH, FN, ID, CMO'K, MHRS, JS, EMB, JGM, SW, JW, ID and AJS were involved in planning the biomarker panels and delivering assay data. RMcM, SG, KG and IFL provided microbiology expertise. TH and AJS drafted the report. All authors contributed to and reviewed the final report.

  • Funding The study was funded by the Wellcome Trust and Department of Health (Health Innovation Challenge Fund 0510/078). Becton Dickinson Biosciences provided kits for cytometric bead array analyses.

  • Competing interests AJS has received funding from GlaxoSmithKline, Boehringer Ingelheim and Astra Zeneca to attend educational conferences, in relation to travel, accommodation and registration. He has also received fees for non-promotional talks from GlaxoSmithKline. No other authors have competing interests to declare.

  • Ethics approval National Research Ethics Service (11/NE/0242 and 11/SS/0089).

  • Provenance and peer review Not commissioned; externally peer reviewed.

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